BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB008H10LP1|AL425947
(853 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig295 1624 0.0
>3x_Contig295
Length = 1297
Score = 1624 bits (818), Expect = 0.0
Identities = 846/853 (99%), Gaps = 3/853 (0%)
Strand = Plus / Plus
Query: 1 gatcattgaaaaacatgaagctagctttaacgtcgttttcttttaacttttttacagcaa 60
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||
Sbjct: 10 gatcattgaaaaacatgaagctagctttaacgtcgttt-ctttta-cttttttacagcaa 67
Query: 61 ctttaactctttcattccaactttcagcctttttatcaaagaactcagaatatgttccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 ctttaactctttcattccaactttcagcctttttatcaaagaactcagaatatgttccat 127
Query: 121 aatcattctgcgaggatggaattgaatatacagcgttgtccatactgcgcatctttagtc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 aatcattctgcgaggatggaattgaatatacagcgttgtccatactgcgcatctttagtc 187
Query: 181 ttgttggttttctaggaggtaaaggtggttgtgtgccagacgatttagattcagaaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 ttgttggttttctaggaggtaaaggtggttgtgtgccagacgatttagattcagaaattt 247
Query: 241 cacgctgaagagcatcactcaaaactggcttcttttttagaacctgtggaggcytttttt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 248 cacgctgaagagcatcactcaaaactggcttcttttttagaacctgtggaggcttttttt 307
Query: 301 tgacaggctgttttttatccgttttagctggggcaacatctgaatctgaatctgagtcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 tgacaggctgttttttatccgttttagctggggcaacatctgaatctgaatctgagtcaa 367
Query: 361 attggattaaatcggggatatcatcttcttcctttatctggtctaaataaaactttttaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 attggattaaatcggggatatcatcttcttcctttatctggtctaaataaaactttttaa 427
Query: 421 tatgatcatttaaagctttcataactcttacgtcattttcagattcatcactcattgaat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 tatgatcatttaaagctttcataactcttacgtcattttcagattcatcactcattgaat 487
Query: 481 tcttgcaacatctgangtatattccaataatctgttttggaaattgactcgcagccgata 540
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tcttgcaacatctgatgtatattccaataatctgttttggaaattgactcgcagccgata 547
Query: 541 cgtaagcctcgaggtcttgctcaccggaatcacctaccagaatgaactttttgttcggga 600
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 548 cgtaagcttcgaggtcttgctcaccggaatcacctaccagaatgaactttttgttcggga 607
Query: 601 aatcattgcatattttcaatattgatgcaagctttctctgtgcactggatttcataatac 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aatcattgcatattttcaatattgatgcaagctttctctgtgcactggatttcataatac 667
Query: 661 ttgagagtaagtwaccagaatactgtttgaggaacatgggtcctaacggatagttttcac 720
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 ttgagagtaagttaccagaatactgtttgaggaacatgggtcctaacggatagttttcac 727
Query: 721 caatatattccgataatattgggtatatctgagcagggggcatttgatacataaaagaaa 780
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 728 caatatattccgataatattgggtatatctgagca-ggggcatttgatacataaaagaaa 786
Query: 781 tcaactgctttgctatcttttaatgtcgtataccataatggcatatcttgaattttccat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 tcaactgctttgctatcttttaatgtcgtataccataatggcatatcttgaattttccat 846
Query: 841 tgttcaaatccgt 853
|||||||||||||
Sbjct: 847 tgttcaaatccgt 859
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7670
Number of Sequences: 1807
Number of extensions: 7670
Number of successful extensions: 69
Number of sequences better than 1.0e-20: 1
length of query: 853
length of database: 10,358,551
effective HSP length: 16
effective length of query: 837
effective length of database: 10,329,639
effective search space: 8645907843
effective search space used: 8645907843
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)